GRAST-SQL: Scaling Text-to-SQL via LLM-efficient Schema Filtering with Functional Dependency Graph Rerankers

GRAST-SQL is a lightweight, open-source schema-filtering framework that scales Text-to-SQL to real-world, very wide schemas by compacting prompts without sacrificing accuracy. It ranks columns with a query-aware LLM encoder enriched by values/metadata, reranks them via a graph transformer over a functional-dependency (FD) graph to capture inter-column structure, and then guarantees joinability with a Steiner-tree spanner to produce a small, connected sub-schema. Across Spider, BIRD, and Spider-2.0-lite, GRAST-SQL delivers near-perfect recall with substantially higher precision than CodeS, SchemaExP, Qwen rerankers, and embedding retrievers, maintains sub-second median latency on typical databases, scales to 23K+ columns, and cuts prompt tokens by up to 50% in end-to-end systems—often with slight accuracy gains—all while using compact models.

This model was presented in the paper Scaling Text2SQL via LLM-efficient Schema Filtering with Functional Dependency Graph Rerankers.

Code: https://github.com/thanhdath/grast-sql

System flow

GRAST-SQL main flow

Datasets

Models

More models can be found in Huggingface collection

Sample Usage

To apply GRAST-SQL to your own database, follow these two simple steps:

Step 1: Initialize (ONE-TIME per database) - Functional Dependency Graph Construction & Metadata Completion

Extract schema information, generate table/column meanings, predict missing keys, and build the functional dependency graph:

python init_schema.py \
    --db-path /home/datht/mats/data/spider/database/concert_singer/concert_singer.sqlite \
    --output concert_singer.pkl \
    --model gpt-4.1-mini

Arguments:

  • --db-path: Path to your SQLite database file (required)
  • --output: Output path for the graph pickle file (default: schema_graph.pkl)
  • --model: OpenAI model to use for meaning generation and key prediction (default: gpt-4.1-mini)

Note: Make sure your OpenAI API key is set in .env.

Step 2: Filter Top-K Columns

Use the GRAST-SQL model to filter the most relevant columns for a given question:

python filter_columns.py \
    --graph concert_singer.pkl \
    --question "Show name, country, age for all singers ordered by age from the oldest to the youngest." \
    --top-k 5

Arguments:

  • --graph: Path to the graph pickle file from Step 1 (required)
  • --question: Natural language question about the database (required)
  • --top-k: Number of top columns to retrieve (default: 10)
  • --checkpoint: Path to GNN checkpoint (default: griffith-bigdata/GRAST-SQL-0.6B-BIRD-Reranker/layer-3-hidden-2048.pt)
  • --encoder-path: Path to encoder model (default: griffith-bigdata/GRAST-SQL-0.6B-BIRD-Reranker)
  • --max-length: Maximum sequence length (default: 4096)
  • --batch-size: Batch size for embedding generation (default: 32)
  • --hidden-dim: Hidden dimension for GNN (default: 2048)
  • --num-layers: Number of GNN layers (default: 3)

Citation

@misc{hoang2025scalingtext2sqlllmefficientschema,
      title={Scaling Text2SQL via LLM-efficient Schema Filtering with Functional Dependency Graph Rerankers}, 
      author={Thanh Dat Hoang and Thanh Tam Nguyen and Thanh Trung Huynh and Hongzhi Yin and Quoc Viet Hung Nguyen},
      year={2025},
      eprint={2512.16083},
      archivePrefix={arXiv},
      primaryClass={cs.DB},
      url={https://arxiv.org/abs/2512.16083}, 
}
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